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Series GSE115266 Query DataSets for GSE115266
Status Public on Nov 14, 2018
Title Virus Infection Induces Expression of Novel RNAs in Human Cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Innate antiviral immune responses are driven by virus-induced changes in host gene expression. In this study, RNA-sequencing of mock-infected and Sendai virus-infected cells was performed to characterize the virus-inducible transcriptome and identify novel virus-inducible RNAs in human cells.
Overall design RNA-sequencing of mock-infected and Sendai virus-infected for 6 hours Namalwa cells in duplicate using Illumina HiSeq2000
Contributor(s) Mandhana R , Horvath CM
Citation(s) 30429577
Submission date Jun 04, 2018
Last update date Mar 27, 2019
Contact name Roli Mandhana
Organization name Northwestern University
Street address 2205 Tech Drive
City Evanston
State/province Illinois
ZIP/Postal code 60208
Country USA
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (4)
GSM3172875 Mock infected rep1
GSM3172876 Mock infected rep2
GSM3172877 Sendai virus-infected rep1
Relations
BioProject PRJNA474435
SRA SRP149665

Download family Format
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Supplementary file Size Download File type/resource
GSE115266_Horvath01_DESeq2_Differential_Gene_Expression.csv.gz 2.8 Mb (ftp) (http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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